Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Znf48Q3US17 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Gm13559-201ENSMUST00000120476 863 ntBASIC14.17□□□□□ -0.14
Znf48Q3US17 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Gm43183-201ENSMUST00000200632 547 ntBASIC14.17□□□□□ -0.14
Znf48Q3US17 Gm21814-202ENSMUST00000203277 873 ntBASIC14.17□□□□□ -0.14
Znf48Q3US17 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.17□□□□□ -0.14
Znf48Q3US17 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Znf48Q3US17 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Znf48Q3US17 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm11539-201ENSMUST00000119837 557 ntBASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm13436-201ENSMUST00000120418 567 ntBASIC14.16□□□□□ -0.14
Znf48Q3US17 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm7889-201ENSMUST00000185591 958 ntBASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.16□□□□□ -0.14
Znf48Q3US17 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Znf48Q3US17 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.16□□□□□ -0.14
Znf48Q3US17 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Znf48Q3US17 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.15□□□□□ -0.14
Znf48Q3US17 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.15□□□□□ -0.14
Znf48Q3US17 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.15□□□□□ -0.14
Znf48Q3US17 Mtag2-201ENSMUST00000058665 714 ntBASIC14.15□□□□□ -0.14
Znf48Q3US17 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Znf48Q3US17 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.15□□□□□ -0.14
Znf48Q3US17 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Znf48Q3US17 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Znf48Q3US17 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Znf48Q3US17 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Znf48Q3US17 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms