Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.18■□□□□ 0.66
Brd9Q3UQU0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Brd9Q3UQU0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brd9Q3UQU0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Gm17808-201ENSMUST00000200859 894 ntBASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd9Q3UQU0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Brd9Q3UQU0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Brd9Q3UQU0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Brd9Q3UQU0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brd9Q3UQU0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.14■□□□□ 0.65
Brd9Q3UQU0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd9Q3UQU0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd9Q3UQU0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd9Q3UQU0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.12■□□□□ 0.65
Brd9Q3UQU0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd9Q3UQU0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms