Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Gm7653-201ENSMUST00000214567 508 ntBASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC9.17□□□□□ -0.94
Ush2AQ2QI47 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gm22175-201ENSMUST00000175007 78 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gm6912-201ENSMUST00000117218 544 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Mir7085-201ENSMUST00000184353 66 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Gm44492-201ENSMUST00000197012 141 ntBASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ush2AQ2QI47 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms