Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Gm5408-201ENSMUST00000197998 747 ntBASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ptchd3Q0EEE2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptchd3Q0EEE2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptchd3Q0EEE2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.58■□□□□ 0.25
Ptchd3Q0EEE2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptchd3Q0EEE2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptchd3Q0EEE2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Ptchd3Q0EEE2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Gm26524-201ENSMUST00000192339 390 ntBASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptchd3Q0EEE2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Rab3c-203ENSMUST00000224180 967 ntBASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptchd3Q0EEE2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms