Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ThraP63058 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.36■□□□□ 0.37
ThraP63058 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.36■□□□□ 0.37
ThraP63058 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.36■□□□□ 0.37
ThraP63058 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ThraP63058 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ThraP63058 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ThraP63058 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.36■□□□□ 0.37
ThraP63058 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ThraP63058 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ThraP63058 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Gm12382-201ENSMUST00000122005 922 ntBASIC17.35■□□□□ 0.37
ThraP63058 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
ThraP63058 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ThraP63058 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.35■□□□□ 0.37
ThraP63058 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ThraP63058 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.35■□□□□ 0.37
ThraP63058 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ThraP63058 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ThraP63058 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ThraP63058 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.34■□□□□ 0.37
ThraP63058 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.34■□□□□ 0.37
ThraP63058 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.34■□□□□ 0.37
ThraP63058 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ThraP63058 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Gm30025-201ENSMUST00000218555 728 ntBASIC17.34■□□□□ 0.37
ThraP63058 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.34■□□□□ 0.37
ThraP63058 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ThraP63058 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ThraP63058 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
ThraP63058 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
ThraP63058 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ThraP63058 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.37
ThraP63058 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ThraP63058 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.33■□□□□ 0.36
ThraP63058 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Gm10231-201ENSMUST00000181584 441 ntBASIC17.33■□□□□ 0.36
ThraP63058 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Gm10175-202ENSMUST00000208752 441 ntBASIC17.33■□□□□ 0.36
ThraP63058 Odf3b-204ENSMUST00000227834 930 ntBASIC17.33■□□□□ 0.36
ThraP63058 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ThraP63058 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ThraP63058 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ThraP63058 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ThraP63058 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.32■□□□□ 0.36
ThraP63058 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms