Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
Lhx1P63006 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.86■□□□□ 0.29
Lhx1P63006 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lhx1P63006 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lhx1P63006 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx1P63006 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lhx1P63006 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lhx1P63006 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.85■□□□□ 0.29
Lhx1P63006 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Gm27389-201ENSMUST00000183622 195 ntBASIC16.85■□□□□ 0.29
Lhx1P63006 Gm7213-201ENSMUST00000215977 950 ntBASIC16.85■□□□□ 0.29
Lhx1P63006 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lhx1P63006 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lhx1P63006 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx1P63006 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lhx1P63006 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx1P63006 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx1P63006 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Lhx1P63006 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.84■□□□□ 0.29
Lhx1P63006 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx1P63006 Gm6659-201ENSMUST00000174752 547 ntBASIC16.84■□□□□ 0.29
Lhx1P63006 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.84■□□□□ 0.29
Lhx1P63006 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lhx1P63006 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.84■□□□□ 0.29
Lhx1P63006 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx1P63006 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx1P63006 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.83■□□□□ 0.29
Lhx1P63006 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx1P63006 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Lhx1P63006 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx1P63006 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx1P63006 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lhx1P63006 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx1P63006 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.83■□□□□ 0.28
Lhx1P63006 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Lhx1P63006 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Lhx1P63006 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx1P63006 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx1P63006 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx1P63006 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Lhx1P63006 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lhx1P63006 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Lhx1P63006 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lhx1P63006 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.82■□□□□ 0.28
Lhx1P63006 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lhx1P63006 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms