Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lrch1P62046 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Gm12350-201ENSMUST00000121208 462 ntBASIC20.18■□□□□ 0.82
Lrch1P62046 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.18■□□□□ 0.82
Lrch1P62046 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Lrch1P62046 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.18■□□□□ 0.82
Lrch1P62046 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lrch1P62046 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrch1P62046 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch1P62046 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Lrch1P62046 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.17■□□□□ 0.82
Lrch1P62046 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Gm13312-201ENSMUST00000119631 718 ntBASIC20.17■□□□□ 0.82
Lrch1P62046 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Gm2213-201ENSMUST00000197485 688 ntBASIC20.17■□□□□ 0.82
Lrch1P62046 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lrch1P62046 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch1P62046 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Lrch1P62046 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch1P62046 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.16■□□□□ 0.82
Lrch1P62046 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch1P62046 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.16■□□□□ 0.82
Lrch1P62046 Rprl3-201ENSMUST00000157400 290 ntBASIC20.16■□□□□ 0.82
Lrch1P62046 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.16■□□□□ 0.82
Lrch1P62046 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch1P62046 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.16■□□□□ 0.82
Lrch1P62046 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch1P62046 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lrch1P62046 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch1P62046 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Lrch1P62046 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44357-201ENSMUST00000195897 142 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm19658-201ENSMUST00000196231 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44367-201ENSMUST00000196836 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44350-201ENSMUST00000197197 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44390-201ENSMUST00000197533 144 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44313-201ENSMUST00000198018 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44486-201ENSMUST00000198508 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44454-201ENSMUST00000198541 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44314-201ENSMUST00000199263 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44394-201ENSMUST00000199558 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44484-201ENSMUST00000199873 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44466-201ENSMUST00000200264 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.15■□□□□ 0.82
Lrch1P62046 Gm44359-201ENSMUST00000200671 138 ntBASIC20.15■□□□□ 0.82
Lrch1P62046 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch1P62046 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lrch1P62046 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Gm27000-201ENSMUST00000182943 842 ntBASIC20.14■□□□□ 0.81
Lrch1P62046 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.14■□□□□ 0.81
Lrch1P62046 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.14■□□□□ 0.81
Lrch1P62046 Gm10060-201ENSMUST00000212002 111 ntBASIC20.14■□□□□ 0.81
Lrch1P62046 Gm5364-201ENSMUST00000216789 889 ntBASIC20.14■□□□□ 0.81
Lrch1P62046 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.14■□□□□ 0.81
Lrch1P62046 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch1P62046 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lrch1P62046 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.13■□□□□ 0.81
Lrch1P62046 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lrch1P62046 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms