Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm8520-201ENSMUST00000186517 868 ntBASIC15.12■□□□□ 0.01
Sec61a1P61620 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sec61a1P61620 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a1P61620 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a1P61620 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a1P61620 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.11■□□□□ 0.01
Sec61a1P61620 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a1P61620 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Sec61a1P61620 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Dio3-201ENSMUST00000097228 1449 ntBASIC15.1■□□□□ 0.01
Sec61a1P61620 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a1P61620 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a1P61620 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sec61a1P61620 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Gm2399-201ENSMUST00000104944 225 ntBASIC15.09■□□□□ 0.01
Sec61a1P61620 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.09■□□□□ 0.01
Sec61a1P61620 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a1P61620 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a1P61620 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.08■□□□□ 0.01
Sec61a1P61620 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a1P61620 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a1P61620 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a1P61620 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.08■□□□□ 0
Sec61a1P61620 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.08■□□□□ 0
Sec61a1P61620 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.08■□□□□ 0
Sec61a1P61620 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Sec61a1P61620 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.08■□□□□ 0
Sec61a1P61620 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a1P61620 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.07■□□□□ 0
Sec61a1P61620 Gm11249-201ENSMUST00000117071 859 ntBASIC15.07■□□□□ 0
Sec61a1P61620 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sec61a1P61620 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sec61a1P61620 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.07■□□□□ 0
Sec61a1P61620 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms