Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpl27P61358 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpl27P61358 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rpl27P61358 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpl27P61358 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.33■□□□□ 0.04
Rpl27P61358 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Rpl27P61358 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpl27P61358 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Gm24841-201ENSMUST00000158676 357 ntBASIC15.33■□□□□ 0.04
Rpl27P61358 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rpl27P61358 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl27P61358 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rpl27P61358 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpl27P61358 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Gm20760-201ENSMUST00000179197 648 ntBASIC15.32■□□□□ 0.04
Rpl27P61358 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rpl27P61358 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpl27P61358 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpl27P61358 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rpl27P61358 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpl27P61358 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Gm10698-201ENSMUST00000182663 604 ntBASIC15.31■□□□□ 0.04
Rpl27P61358 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.31■□□□□ 0.04
Rpl27P61358 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rpl27P61358 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.31■□□□□ 0.04
Rpl27P61358 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpl27P61358 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rpl27P61358 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.3■□□□□ 0.04
Rpl27P61358 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rpl27P61358 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rpl27P61358 Gm10653-202ENSMUST00000139570 835 ntBASIC15.3■□□□□ 0.04
Rpl27P61358 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rpl27P61358 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.3■□□□□ 0.04
Rpl27P61358 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Rpl27P61358 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpl27P61358 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.29■□□□□ 0.04
Rpl27P61358 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpl27P61358 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rpl27P61358 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpl27P61358 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpl27P61358 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rpl27P61358 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms