Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp25P57080 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp25P57080 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.41■□□□□ 0.7
Usp25P57080 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp25P57080 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp25P57080 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp25P57080 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp25P57080 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Usp25P57080 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp25P57080 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp25P57080 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Gm7291-201ENSMUST00000199147 382 ntBASIC19.4■□□□□ 0.7
Usp25P57080 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.4■□□□□ 0.7
Usp25P57080 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp25P57080 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp25P57080 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp25P57080 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.39■□□□□ 0.7
Usp25P57080 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp25P57080 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp25P57080 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp25P57080 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp25P57080 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Usp25P57080 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp25P57080 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp25P57080 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp25P57080 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp25P57080 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp25P57080 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp25P57080 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp25P57080 Gm6365-201ENSMUST00000054711 744 ntBASIC19.38■□□□□ 0.69
Usp25P57080 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp25P57080 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp25P57080 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp25P57080 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp25P57080 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp25P57080 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp25P57080 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp25P57080 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp25P57080 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms