Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
SmoP56726 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.24■□□□□ 0.35
SmoP56726 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Gm18958-201ENSMUST00000174258 762 ntBASIC17.24■□□□□ 0.35
SmoP56726 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.24■□□□□ 0.35
SmoP56726 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SmoP56726 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.24■□□□□ 0.35
SmoP56726 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.24■□□□□ 0.35
SmoP56726 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.24■□□□□ 0.35
SmoP56726 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SmoP56726 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.24■□□□□ 0.35
SmoP56726 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SmoP56726 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.24■□□□□ 0.35
SmoP56726 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.24■□□□□ 0.35
SmoP56726 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SmoP56726 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SmoP56726 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.23■□□□□ 0.35
SmoP56726 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.23■□□□□ 0.35
SmoP56726 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Gm27000-201ENSMUST00000182943 842 ntBASIC17.23■□□□□ 0.35
SmoP56726 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SmoP56726 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SmoP56726 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.23■□□□□ 0.35
SmoP56726 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SmoP56726 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SmoP56726 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SmoP56726 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SmoP56726 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SmoP56726 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.22■□□□□ 0.35
SmoP56726 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.22■□□□□ 0.35
SmoP56726 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.22■□□□□ 0.35
SmoP56726 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.22■□□□□ 0.35
SmoP56726 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.22■□□□□ 0.35
SmoP56726 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SmoP56726 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SmoP56726 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SmoP56726 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.21■□□□□ 0.35
SmoP56726 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.21■□□□□ 0.35
SmoP56726 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SmoP56726 Gm10566-201ENSMUST00000086739 996 ntBASIC17.21■□□□□ 0.35
SmoP56726 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SmoP56726 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SmoP56726 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SmoP56726 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.21■□□□□ 0.35
SmoP56726 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SmoP56726 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SmoP56726 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms