Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.13■□□□□ 0.49
NcanP55066 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.13■□□□□ 0.49
NcanP55066 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.13■□□□□ 0.49
NcanP55066 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NcanP55066 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
NcanP55066 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
NcanP55066 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.12■□□□□ 0.49
NcanP55066 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.12■□□□□ 0.49
NcanP55066 Gm27000-201ENSMUST00000182943 842 ntBASIC18.12■□□□□ 0.49
NcanP55066 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.12■□□□□ 0.49
NcanP55066 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.12■□□□□ 0.49
NcanP55066 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Psmb5-202ENSMUST00000227257 622 ntBASIC18.12■□□□□ 0.49
NcanP55066 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NcanP55066 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NcanP55066 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NcanP55066 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.11■□□□□ 0.49
NcanP55066 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
NcanP55066 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NcanP55066 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.11■□□□□ 0.49
NcanP55066 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NcanP55066 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.11■□□□□ 0.49
NcanP55066 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NcanP55066 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Fst-202ENSMUST00000223640 2612 ntBASIC18.11■□□□□ 0.49
NcanP55066 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NcanP55066 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Gm13312-201ENSMUST00000119631 718 ntBASIC18.1■□□□□ 0.49
NcanP55066 Gm12260-201ENSMUST00000122447 411 ntBASIC18.1■□□□□ 0.49
NcanP55066 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.1■□□□□ 0.49
NcanP55066 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.1■□□□□ 0.49
NcanP55066 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.1■□□□□ 0.49
NcanP55066 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NcanP55066 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NcanP55066 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NcanP55066 Gm5745-201ENSMUST00000183748 313 ntBASIC18.09■□□□□ 0.49
NcanP55066 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.09■□□□□ 0.49
NcanP55066 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NcanP55066 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NcanP55066 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NcanP55066 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
NcanP55066 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NcanP55066 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NcanP55066 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NcanP55066 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NcanP55066 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Gm14494-201ENSMUST00000118786 435 ntBASIC18.08■□□□□ 0.48
NcanP55066 Rprl3-201ENSMUST00000157400 290 ntBASIC18.08■□□□□ 0.48
NcanP55066 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
NcanP55066 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NcanP55066 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.08■□□□□ 0.48
NcanP55066 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NcanP55066 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NcanP55066 Idnk-204ENSMUST00000226010 1898 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms