Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Msh6P54276 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Msh6P54276 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Msh6P54276 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.77■■□□□ 1.08
Msh6P54276 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.77■■□□□ 1.08
Msh6P54276 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Msh6P54276 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Msh6P54276 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Msh6P54276 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Msh6P54276 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Msh6P54276 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.76■■□□□ 1.07
Msh6P54276 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Msh6P54276 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.76■■□□□ 1.07
Msh6P54276 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Msh6P54276 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.76■■□□□ 1.07
Msh6P54276 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh6P54276 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Gm15794-201ENSMUST00000120182 631 ntBASIC21.75■■□□□ 1.07
Msh6P54276 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Msh6P54276 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.75■■□□□ 1.07
Msh6P54276 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.75■■□□□ 1.07
Msh6P54276 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Msh6P54276 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.75■■□□□ 1.07
Msh6P54276 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh6P54276 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.74■■□□□ 1.07
Msh6P54276 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Msh6P54276 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.74■■□□□ 1.07
Msh6P54276 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh6P54276 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.73■■□□□ 1.07
Msh6P54276 Gm43514-201ENSMUST00000198852 424 ntBASIC21.73■■□□□ 1.07
Msh6P54276 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.73■■□□□ 1.07
Msh6P54276 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh6P54276 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Msh6P54276 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh6P54276 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.72■■□□□ 1.07
Msh6P54276 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Msh6P54276 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Msh6P54276 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.71■■□□□ 1.07
Msh6P54276 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.71■■□□□ 1.07
Msh6P54276 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Msh6P54276 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Msh6P54276 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms