Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.14■□□□□ 0.33
Fdft1P53798 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.14■□□□□ 0.33
Fdft1P53798 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.14■□□□□ 0.33
Fdft1P53798 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.14■□□□□ 0.33
Fdft1P53798 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Fdft1P53798 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Fdft1P53798 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.14■□□□□ 0.33
Fdft1P53798 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Fdft1P53798 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Fdft1P53798 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fdft1P53798 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fdft1P53798 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.13■□□□□ 0.33
Fdft1P53798 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Fdft1P53798 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.13■□□□□ 0.33
Fdft1P53798 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Fdft1P53798 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Fdft1P53798 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.13■□□□□ 0.33
Fdft1P53798 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.13■□□□□ 0.33
Fdft1P53798 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.13■□□□□ 0.33
Fdft1P53798 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fdft1P53798 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Fdft1P53798 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fdft1P53798 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.12■□□□□ 0.33
Fdft1P53798 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fdft1P53798 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fdft1P53798 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fdft1P53798 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.11■□□□□ 0.33
Fdft1P53798 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Gm10653-202ENSMUST00000139570 835 ntBASIC17.11■□□□□ 0.33
Fdft1P53798 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.11■□□□□ 0.33
Fdft1P53798 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fdft1P53798 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fdft1P53798 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Fdft1P53798 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fdft1P53798 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.1■□□□□ 0.33
Fdft1P53798 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.1■□□□□ 0.33
Fdft1P53798 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Fdft1P53798 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.1■□□□□ 0.33
Fdft1P53798 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.1■□□□□ 0.33
Fdft1P53798 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Fdft1P53798 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fdft1P53798 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
Fdft1P53798 Gm5643-201ENSMUST00000117081 966 ntBASIC17.09■□□□□ 0.33
Fdft1P53798 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 Gm37292-201ENSMUST00000192062 758 ntBASIC17.09■□□□□ 0.33
Fdft1P53798 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.09■□□□□ 0.33
Fdft1P53798 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fdft1P53798 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms