Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Gm9731-201ENSMUST00000209480 747 ntBASIC16.97■□□□□ 0.31
Pdx1P52946 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.97■□□□□ 0.31
Pdx1P52946 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.97■□□□□ 0.31
Pdx1P52946 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Pdx1P52946 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pdx1P52946 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.96■□□□□ 0.31
Pdx1P52946 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.96■□□□□ 0.31
Pdx1P52946 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.96■□□□□ 0.31
Pdx1P52946 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Pdx1P52946 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pdx1P52946 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdx1P52946 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pdx1P52946 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pdx1P52946 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.96■□□□□ 0.3
Pdx1P52946 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pdx1P52946 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pdx1P52946 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.96■□□□□ 0.3
Pdx1P52946 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Pdx1P52946 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdx1P52946 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pdx1P52946 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdx1P52946 Gm7791-201ENSMUST00000219066 539 ntBASIC16.95■□□□□ 0.3
Pdx1P52946 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pdx1P52946 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdx1P52946 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.94■□□□□ 0.3
Pdx1P52946 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pdx1P52946 Mir6982-201ENSMUST00000184354 68 ntBASIC16.94■□□□□ 0.3
Pdx1P52946 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pdx1P52946 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pdx1P52946 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.94■□□□□ 0.3
Pdx1P52946 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdx1P52946 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
Pdx1P52946 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.93■□□□□ 0.3
Pdx1P52946 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.93■□□□□ 0.3
Pdx1P52946 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.93■□□□□ 0.3
Pdx1P52946 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pdx1P52946 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Gm30025-201ENSMUST00000218555 728 ntBASIC16.93■□□□□ 0.3
Pdx1P52946 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdx1P52946 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms