Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.4■□□□□ 0.38
Lhx3P50481 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.4■□□□□ 0.38
Lhx3P50481 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.4■□□□□ 0.38
Lhx3P50481 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lhx3P50481 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lhx3P50481 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lhx3P50481 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.4■□□□□ 0.38
Lhx3P50481 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.4■□□□□ 0.38
Lhx3P50481 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lhx3P50481 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lhx3P50481 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lhx3P50481 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lhx3P50481 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Lhx3P50481 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.39■□□□□ 0.37
Lhx3P50481 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx3P50481 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.38■□□□□ 0.37
Lhx3P50481 Gm7213-201ENSMUST00000215977 950 ntBASIC17.38■□□□□ 0.37
Lhx3P50481 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx3P50481 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Mir1668-201ENSMUST00000184114 107 ntBASIC17.37■□□□□ 0.37
Lhx3P50481 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Lhx3P50481 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.37■□□□□ 0.37
Lhx3P50481 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx3P50481 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
Lhx3P50481 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lhx3P50481 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.36■□□□□ 0.37
Lhx3P50481 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lhx3P50481 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.36■□□□□ 0.37
Lhx3P50481 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.36■□□□□ 0.37
Lhx3P50481 Gm10566-201ENSMUST00000086739 996 ntBASIC17.36■□□□□ 0.37
Lhx3P50481 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Lhx3P50481 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx3P50481 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.36■□□□□ 0.37
Lhx3P50481 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lhx3P50481 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.36■□□□□ 0.37
Lhx3P50481 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lhx3P50481 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lhx3P50481 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Lhx3P50481 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms