Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Xcl1P47993 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Xcl1P47993 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Xcl1P47993 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Xcl1P47993 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Xcl1P47993 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC11.24□□□□□ -0.61
Xcl1P47993 Etf1-202ENSMUST00000180351 108 ntBASIC11.24□□□□□ -0.61
Xcl1P47993 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Xcl1P47993 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.24□□□□□ -0.61
Xcl1P47993 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.24□□□□□ -0.61
Xcl1P47993 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Xcl1P47993 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Xcl1P47993 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Xcl1P47993 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.23□□□□□ -0.61
Xcl1P47993 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Xcl1P47993 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Xcl1P47993 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Xcl1P47993 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Xcl1P47993 Gm10399-202ENSMUST00000202768 748 ntBASIC11.23□□□□□ -0.61
Xcl1P47993 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.23□□□□□ -0.61
Xcl1P47993 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Xcl1P47993 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Xcl1P47993 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Xcl1P47993 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Xcl1P47993 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Xcl1P47993 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Xcl1P47993 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Xcl1P47993 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Xcl1P47993 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.22□□□□□ -0.61
Xcl1P47993 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Xcl1P47993 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Xcl1P47993 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Xcl1P47993 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Xcl1P47993 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.21□□□□□ -0.61
Xcl1P47993 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Xcl1P47993 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.21□□□□□ -0.61
Xcl1P47993 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC11.21□□□□□ -0.61
Xcl1P47993 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC11.21□□□□□ -0.61
Xcl1P47993 Scarna2-201ENSMUST00000157560 414 ntBASIC11.21□□□□□ -0.61
Xcl1P47993 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC11.21□□□□□ -0.61
Xcl1P47993 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Gm6311-201ENSMUST00000073790 878 ntBASIC11.21□□□□□ -0.61
Xcl1P47993 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms