Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44357-201ENSMUST00000195897 142 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm19658-201ENSMUST00000196231 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44367-201ENSMUST00000196836 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44350-201ENSMUST00000197197 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44390-201ENSMUST00000197533 144 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44313-201ENSMUST00000198018 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44486-201ENSMUST00000198508 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44454-201ENSMUST00000198541 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44314-201ENSMUST00000199263 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44394-201ENSMUST00000199558 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44484-201ENSMUST00000199873 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44466-201ENSMUST00000200264 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Gm44359-201ENSMUST00000200671 138 ntBASIC20.65■□□□□ 0.9
Nedd4P46935 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nedd4P46935 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.64■□□□□ 0.9
Nedd4P46935 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nedd4P46935 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nedd4P46935 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4P46935 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Nedd4P46935 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nedd4P46935 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Nedd4P46935 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.63■□□□□ 0.89
Nedd4P46935 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Nedd4P46935 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.63■□□□□ 0.89
Nedd4P46935 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.63■□□□□ 0.89
Nedd4P46935 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.63■□□□□ 0.89
Nedd4P46935 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4P46935 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nedd4P46935 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.62■□□□□ 0.89
Nedd4P46935 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.62■□□□□ 0.89
Nedd4P46935 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.62■□□□□ 0.89
Nedd4P46935 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4P46935 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nedd4P46935 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.61■□□□□ 0.89
Nedd4P46935 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Gm15467-201ENSMUST00000120582 445 ntBASIC20.61■□□□□ 0.89
Nedd4P46935 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Nedd4P46935 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.61■□□□□ 0.89
Nedd4P46935 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.61■□□□□ 0.89
Nedd4P46935 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.61■□□□□ 0.89
Nedd4P46935 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4P46935 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.6■□□□□ 0.89
Nedd4P46935 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd4P46935 Gm23935-201ENSMUST00000102303 57 ntBASIC20.6■□□□□ 0.89
Nedd4P46935 Gm24270-201ENSMUST00000102326 57 ntBASIC20.6■□□□□ 0.89
Nedd4P46935 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd4P46935 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Nedd4P46935 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Gm24245-201ENSMUST00000157318 57 ntBASIC20.6■□□□□ 0.89
Nedd4P46935 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nedd4P46935 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nedd4P46935 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4P46935 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4P46935 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Nedd4P46935 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4P46935 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nedd4P46935 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms