Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mir8112-201ENSMUST00000184382 131 ntBASIC16.22■□□□□ 0.19
Nkx2-6P43688 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.22■□□□□ 0.19
Nkx2-6P43688 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.22■□□□□ 0.19
Nkx2-6P43688 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Gm14859-201ENSMUST00000117752 357 ntBASIC16.21■□□□□ 0.19
Nkx2-6P43688 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Gm7213-201ENSMUST00000215977 950 ntBASIC16.21■□□□□ 0.19
Nkx2-6P43688 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.21■□□□□ 0.19
Nkx2-6P43688 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-6P43688 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-6P43688 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-6P43688 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.2■□□□□ 0.18
Nkx2-6P43688 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-6P43688 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.19■□□□□ 0.18
Nkx2-6P43688 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.19■□□□□ 0.18
Nkx2-6P43688 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.19■□□□□ 0.18
Nkx2-6P43688 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-6P43688 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Gm11355-201ENSMUST00000121120 306 ntBASIC16.18■□□□□ 0.18
Nkx2-6P43688 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Ank2-226ENSMUST00000189368 339 ntBASIC16.18■□□□□ 0.18
Nkx2-6P43688 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms