Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.41■□□□□ 0.22
Sox18P43680 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.41■□□□□ 0.22
Sox18P43680 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sox18P43680 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox18P43680 Gm10052-201ENSMUST00000168019 960 ntBASIC16.4■□□□□ 0.22
Sox18P43680 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Gm7729-201ENSMUST00000050143 801 ntBASIC16.4■□□□□ 0.22
Sox18P43680 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox18P43680 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox18P43680 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox18P43680 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.39■□□□□ 0.21
Sox18P43680 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Sox18P43680 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Gm10418-201ENSMUST00000100943 576 ntBASIC16.39■□□□□ 0.21
Sox18P43680 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox18P43680 Gm15794-201ENSMUST00000120182 631 ntBASIC16.39■□□□□ 0.21
Sox18P43680 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sox18P43680 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox18P43680 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sox18P43680 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sox18P43680 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sox18P43680 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Actl10-202ENSMUST00000226583 1501 ntBASIC16.39■□□□□ 0.21
Sox18P43680 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox18P43680 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.38■□□□□ 0.21
Sox18P43680 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox18P43680 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.38■□□□□ 0.21
Sox18P43680 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.38■□□□□ 0.21
Sox18P43680 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.38■□□□□ 0.21
Sox18P43680 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.38■□□□□ 0.21
Sox18P43680 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sox18P43680 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox18P43680 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox18P43680 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.37■□□□□ 0.21
Sox18P43680 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sox18P43680 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.37■□□□□ 0.21
Sox18P43680 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox18P43680 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.37■□□□□ 0.21
Sox18P43680 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox18P43680 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Sox18P43680 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Sox18P43680 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Sox18P43680 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.36■□□□□ 0.21
Sox18P43680 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sox18P43680 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms