Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sdc2P43407 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.26■□□□□ 0.67
Sdc2P43407 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.26■□□□□ 0.67
Sdc2P43407 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Gm42545-201ENSMUST00000202755 922 ntBASIC19.26■□□□□ 0.67
Sdc2P43407 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Gm18025-201ENSMUST00000221733 862 ntBASIC19.26■□□□□ 0.67
Sdc2P43407 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sdc2P43407 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.25■□□□□ 0.67
Sdc2P43407 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sdc2P43407 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.25■□□□□ 0.67
Sdc2P43407 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.25■□□□□ 0.67
Sdc2P43407 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sdc2P43407 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
Sdc2P43407 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc2P43407 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.24■□□□□ 0.67
Sdc2P43407 Gm20049-201ENSMUST00000219950 730 ntBASIC19.24■□□□□ 0.67
Sdc2P43407 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc2P43407 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sdc2P43407 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.23■□□□□ 0.67
Sdc2P43407 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.23■□□□□ 0.67
Sdc2P43407 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Sdc2P43407 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.23■□□□□ 0.67
Sdc2P43407 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sdc2P43407 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc2P43407 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.22■□□□□ 0.67
Sdc2P43407 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Gm12441-201ENSMUST00000121806 588 ntBASIC19.22■□□□□ 0.67
Sdc2P43407 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.22■□□□□ 0.67
Sdc2P43407 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sdc2P43407 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc2P43407 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sdc2P43407 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sdc2P43407 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sdc2P43407 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms