Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.17□□□□□ -0.14
Hist1h1aP43275 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.17□□□□□ -0.14
Hist1h1aP43275 Gm29791-202ENSMUST00000207888 369 ntBASIC14.17□□□□□ -0.14
Hist1h1aP43275 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h1aP43275 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Gm44549-201ENSMUST00000208351 577 ntBASIC14.16□□□□□ -0.14
Hist1h1aP43275 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.16□□□□□ -0.14
Hist1h1aP43275 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h1aP43275 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Flg-201ENSMUST00000050758 1488 ntBASIC14.15□□□□□ -0.14
Hist1h1aP43275 Gm10418-201ENSMUST00000100943 576 ntBASIC14.15□□□□□ -0.14
Hist1h1aP43275 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.15□□□□□ -0.14
Hist1h1aP43275 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms