Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.68■□□□□ 0.42
Msh2P43247 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Msh2P43247 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.68■□□□□ 0.42
Msh2P43247 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Msh2P43247 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.68■□□□□ 0.42
Msh2P43247 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Msh2P43247 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Msh2P43247 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh2P43247 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Msh2P43247 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Msh2P43247 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh2P43247 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Msh2P43247 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh2P43247 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.67■□□□□ 0.42
Msh2P43247 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Mtag2-201ENSMUST00000058665 714 ntBASIC17.67■□□□□ 0.42
Msh2P43247 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh2P43247 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Msh2P43247 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh2P43247 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
Msh2P43247 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Msh2P43247 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
Msh2P43247 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msh2P43247 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msh2P43247 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.66■□□□□ 0.42
Msh2P43247 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.66■□□□□ 0.42
Msh2P43247 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.66■□□□□ 0.42
Msh2P43247 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.66■□□□□ 0.42
Msh2P43247 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Msh2P43247 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh2P43247 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Msh2P43247 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
Msh2P43247 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh2P43247 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh2P43247 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh2P43247 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh2P43247 Mir8112-201ENSMUST00000184382 131 ntBASIC17.64■□□□□ 0.41
Msh2P43247 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh2P43247 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh2P43247 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms