Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.38■□□□□ 0.53
HttP42859 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HttP42859 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HttP42859 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.37■□□□□ 0.53
HttP42859 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
HttP42859 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.37■□□□□ 0.53
HttP42859 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HttP42859 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.37■□□□□ 0.53
HttP42859 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.37■□□□□ 0.53
HttP42859 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HttP42859 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.36■□□□□ 0.53
HttP42859 Gm13312-201ENSMUST00000119631 718 ntBASIC18.36■□□□□ 0.53
HttP42859 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Gm15590-201ENSMUST00000078419 552 ntBASIC18.36■□□□□ 0.53
HttP42859 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HttP42859 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.36■□□□□ 0.53
HttP42859 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.36■□□□□ 0.53
HttP42859 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HttP42859 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HttP42859 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HttP42859 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HttP42859 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
HttP42859 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Gm15173-201ENSMUST00000122049 433 ntBASIC18.35■□□□□ 0.53
HttP42859 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.35■□□□□ 0.53
HttP42859 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HttP42859 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HttP42859 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.34■□□□□ 0.53
HttP42859 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.34■□□□□ 0.53
HttP42859 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.34■□□□□ 0.53
HttP42859 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HttP42859 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.34■□□□□ 0.53
HttP42859 Gm6550-201ENSMUST00000187574 993 ntBASIC18.34■□□□□ 0.53
HttP42859 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HttP42859 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HttP42859 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HttP42859 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HttP42859 Gm13418-201ENSMUST00000119097 944 ntBASIC18.33■□□□□ 0.53
HttP42859 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HttP42859 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HttP42859 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HttP42859 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HttP42859 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HttP42859 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.33■□□□□ 0.52
HttP42859 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HttP42859 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.32■□□□□ 0.52
HttP42859 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.32■□□□□ 0.52
HttP42859 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HttP42859 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HttP42859 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.32■□□□□ 0.52
HttP42859 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HttP42859 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HttP42859 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms