Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.21□□□□□ -0.13
Abca1P41233 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Abca1P41233 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Abca1P41233 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.21□□□□□ -0.14
Abca1P41233 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abca1P41233 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Abca1P41233 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Abca1P41233 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.2□□□□□ -0.14
Abca1P41233 Gm4974-201ENSMUST00000209974 875 ntBASIC14.2□□□□□ -0.14
Abca1P41233 Gm7791-201ENSMUST00000219066 539 ntBASIC14.2□□□□□ -0.14
Abca1P41233 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Abca1P41233 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.2□□□□□ -0.14
Abca1P41233 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Abca1P41233 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abca1P41233 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Abca1P41233 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.19□□□□□ -0.14
Abca1P41233 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Abca1P41233 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Abca1P41233 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.19□□□□□ -0.14
Abca1P41233 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.19□□□□□ -0.14
Abca1P41233 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Gm18669-201ENSMUST00000216049 778 ntBASIC14.19□□□□□ -0.14
Abca1P41233 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.19□□□□□ -0.14
Abca1P41233 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Abca1P41233 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.19□□□□□ -0.14
Abca1P41233 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.19□□□□□ -0.14
Abca1P41233 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abca1P41233 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.18□□□□□ -0.14
Abca1P41233 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Abca1P41233 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Abca1P41233 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.18□□□□□ -0.14
Abca1P41233 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.18□□□□□ -0.14
Abca1P41233 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms