Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.09□□□□□ -0.15
VhlP40338 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VhlP40338 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VhlP40338 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VhlP40338 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.08□□□□□ -0.16
VhlP40338 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
VhlP40338 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VhlP40338 Gm11643-201ENSMUST00000119578 864 ntBASIC14.08□□□□□ -0.16
VhlP40338 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
VhlP40338 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
VhlP40338 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Gm42642-201ENSMUST00000200683 355 ntBASIC14.08□□□□□ -0.16
VhlP40338 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.08□□□□□ -0.16
VhlP40338 Gm44549-201ENSMUST00000208351 577 ntBASIC14.08□□□□□ -0.16
VhlP40338 Gm18671-201ENSMUST00000214826 683 ntBASIC14.08□□□□□ -0.16
VhlP40338 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.08□□□□□ -0.16
VhlP40338 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VhlP40338 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VhlP40338 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.07□□□□□ -0.16
VhlP40338 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VhlP40338 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.07□□□□□ -0.16
VhlP40338 Gm7290-201ENSMUST00000104990 617 ntBASIC14.07□□□□□ -0.16
VhlP40338 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.07□□□□□ -0.16
VhlP40338 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Gm12918-201ENSMUST00000120234 636 ntBASIC14.07□□□□□ -0.16
VhlP40338 Gm15710-201ENSMUST00000121821 636 ntBASIC14.07□□□□□ -0.16
VhlP40338 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VhlP40338 Gm5075-201ENSMUST00000196916 622 ntBASIC14.07□□□□□ -0.16
VhlP40338 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.07□□□□□ -0.16
VhlP40338 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VhlP40338 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VhlP40338 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.07□□□□□ -0.16
VhlP40338 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.07□□□□□ -0.16
VhlP40338 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VhlP40338 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VhlP40338 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.06□□□□□ -0.16
VhlP40338 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.06□□□□□ -0.16
VhlP40338 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.06□□□□□ -0.16
VhlP40338 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.06□□□□□ -0.16
VhlP40338 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VhlP40338 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.06□□□□□ -0.16
VhlP40338 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VhlP40338 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VhlP40338 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VhlP40338 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VhlP40338 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.05□□□□□ -0.16
VhlP40338 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VhlP40338 Gm7291-201ENSMUST00000199147 382 ntBASIC14.05□□□□□ -0.16
VhlP40338 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.05□□□□□ -0.16
VhlP40338 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms