Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RetP35546 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RetP35546 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RetP35546 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RetP35546 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.08■□□□□ 0.16
RetP35546 Gm12382-201ENSMUST00000122005 922 ntBASIC16.08■□□□□ 0.16
RetP35546 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RetP35546 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.08■□□□□ 0.16
RetP35546 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RetP35546 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RetP35546 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RetP35546 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.07■□□□□ 0.16
RetP35546 Mir2861-201ENSMUST00000175539 82 ntBASIC16.07■□□□□ 0.16
RetP35546 Gm27741-201ENSMUST00000185060 237 ntBASIC16.07■□□□□ 0.16
RetP35546 Gm37292-201ENSMUST00000192062 758 ntBASIC16.07■□□□□ 0.16
RetP35546 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.07■□□□□ 0.16
RetP35546 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RetP35546 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.07■□□□□ 0.16
RetP35546 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RetP35546 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.06■□□□□ 0.16
RetP35546 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.06■□□□□ 0.16
RetP35546 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RetP35546 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.06■□□□□ 0.16
RetP35546 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RetP35546 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.06■□□□□ 0.16
RetP35546 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
RetP35546 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RetP35546 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
RetP35546 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RetP35546 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
RetP35546 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.05■□□□□ 0.16
RetP35546 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RetP35546 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.05■□□□□ 0.16
RetP35546 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RetP35546 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Mir6349-201ENSMUST00000184059 97 ntBASIC16.04■□□□□ 0.16
RetP35546 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.04■□□□□ 0.16
RetP35546 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.04■□□□□ 0.16
RetP35546 Gm18959-201ENSMUST00000208954 655 ntBASIC16.04■□□□□ 0.16
RetP35546 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.04■□□□□ 0.16
RetP35546 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RetP35546 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RetP35546 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RetP35546 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms