Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Slc6a1P31648 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a1P31648 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a1P31648 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Slc6a1P31648 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a1P31648 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Slc6a1P31648 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a1P31648 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a1P31648 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.76□□□□□ -0.05
Slc6a1P31648 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Slc6a1P31648 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.76□□□□□ -0.05
Slc6a1P31648 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.76□□□□□ -0.05
Slc6a1P31648 Gm7514-201ENSMUST00000209475 934 ntBASIC14.76□□□□□ -0.05
Slc6a1P31648 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a1P31648 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Gm10602-201ENSMUST00000098239 609 ntBASIC14.75□□□□□ -0.05
Slc6a1P31648 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Slc6a1P31648 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.75□□□□□ -0.05
Slc6a1P31648 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc6a1P31648 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Gm13146-201ENSMUST00000118508 780 ntBASIC14.74□□□□□ -0.05
Slc6a1P31648 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.74□□□□□ -0.05
Slc6a1P31648 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Slc6a1P31648 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Slc6a1P31648 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Slc6a1P31648 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc6a1P31648 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms