Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col2a1P28481 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col2a1P28481 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col2a1P28481 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Col2a1P28481 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Gm7153-201ENSMUST00000117092 455 ntBASIC19.48■□□□□ 0.71
Col2a1P28481 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Col2a1P28481 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col2a1P28481 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.47■□□□□ 0.71
Col2a1P28481 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.47■□□□□ 0.71
Col2a1P28481 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Col2a1P28481 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.47■□□□□ 0.71
Col2a1P28481 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Col2a1P28481 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.47■□□□□ 0.71
Col2a1P28481 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col2a1P28481 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.46■□□□□ 0.71
Col2a1P28481 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col2a1P28481 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.46■□□□□ 0.71
Col2a1P28481 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col2a1P28481 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.45■□□□□ 0.7
Col2a1P28481 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.45■□□□□ 0.7
Col2a1P28481 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col2a1P28481 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Col2a1P28481 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col2a1P28481 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.44■□□□□ 0.7
Col2a1P28481 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col2a1P28481 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col2a1P28481 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.44■□□□□ 0.7
Col2a1P28481 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col2a1P28481 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col2a1P28481 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Col2a1P28481 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.43■□□□□ 0.7
Col2a1P28481 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.43■□□□□ 0.7
Col2a1P28481 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col2a1P28481 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.43■□□□□ 0.7
Col2a1P28481 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.43■□□□□ 0.7
Col2a1P28481 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col2a1P28481 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.42■□□□□ 0.7
Col2a1P28481 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col2a1P28481 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.42■□□□□ 0.7
Col2a1P28481 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col2a1P28481 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col2a1P28481 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col2a1P28481 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.42■□□□□ 0.7
Col2a1P28481 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms