Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
BrafP28028 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Gm29257-201ENSMUST00000186115 639 ntBASIC16.78■□□□□ 0.28
BrafP28028 Gm20049-201ENSMUST00000219950 730 ntBASIC16.78■□□□□ 0.28
BrafP28028 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Mtag2-201ENSMUST00000058665 714 ntBASIC16.78■□□□□ 0.28
BrafP28028 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BrafP28028 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.78■□□□□ 0.28
BrafP28028 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BrafP28028 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BrafP28028 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BrafP28028 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BrafP28028 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BrafP28028 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
BrafP28028 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
BrafP28028 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
BrafP28028 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.77■□□□□ 0.28
BrafP28028 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BrafP28028 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BrafP28028 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
BrafP28028 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BrafP28028 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BrafP28028 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BrafP28028 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BrafP28028 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.77■□□□□ 0.27
BrafP28028 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BrafP28028 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BrafP28028 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BrafP28028 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Gm11249-201ENSMUST00000117071 859 ntBASIC16.75■□□□□ 0.27
BrafP28028 Gm13158-201ENSMUST00000122007 736 ntBASIC16.75■□□□□ 0.27
BrafP28028 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Mir6349-201ENSMUST00000184059 97 ntBASIC16.75■□□□□ 0.27
BrafP28028 Gm29791-202ENSMUST00000207888 369 ntBASIC16.75■□□□□ 0.27
BrafP28028 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.75■□□□□ 0.27
BrafP28028 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BrafP28028 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BrafP28028 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.74■□□□□ 0.27
BrafP28028 Idnk-204ENSMUST00000226010 1898 ntBASIC16.74■□□□□ 0.27
BrafP28028 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BrafP28028 Gm27275-201ENSMUST00000184318 272 ntBASIC16.74■□□□□ 0.27
BrafP28028 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.74■□□□□ 0.27
BrafP28028 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.74■□□□□ 0.27
BrafP28028 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.74■□□□□ 0.27
BrafP28028 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BrafP28028 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BrafP28028 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
BrafP28028 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BrafP28028 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BrafP28028 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BrafP28028 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms