Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Pde6aP27664 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.9■□□□□ 0.78
Pde6aP27664 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Pde6aP27664 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pde6aP27664 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.9■□□□□ 0.78
Pde6aP27664 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pde6aP27664 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Pde6aP27664 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pde6aP27664 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pde6aP27664 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.89■□□□□ 0.77
Pde6aP27664 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6aP27664 Gm27000-201ENSMUST00000182943 842 ntBASIC19.89■□□□□ 0.77
Pde6aP27664 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.89■□□□□ 0.77
Pde6aP27664 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6aP27664 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6aP27664 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6aP27664 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6aP27664 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pde6aP27664 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pde6aP27664 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.88■□□□□ 0.77
Pde6aP27664 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pde6aP27664 Gm7370-201ENSMUST00000219471 767 ntBASIC19.88■□□□□ 0.77
Pde6aP27664 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6aP27664 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pde6aP27664 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pde6aP27664 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6aP27664 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pde6aP27664 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pde6aP27664 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.86■□□□□ 0.77
Pde6aP27664 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Gm6433-201ENSMUST00000118634 875 ntBASIC19.86■□□□□ 0.77
Pde6aP27664 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pde6aP27664 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.86■□□□□ 0.77
Pde6aP27664 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pde6aP27664 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pde6aP27664 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.86■□□□□ 0.77
Pde6aP27664 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6aP27664 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pde6aP27664 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pde6aP27664 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.85■□□□□ 0.77
Pde6aP27664 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.85■□□□□ 0.77
Pde6aP27664 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.85■□□□□ 0.77
Pde6aP27664 Gm2274-201ENSMUST00000184539 609 ntBASIC19.85■□□□□ 0.77
Pde6aP27664 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.85■□□□□ 0.77
Pde6aP27664 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pde6aP27664 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6aP27664 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms