Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.31■□□□□ 0.2
Rpl3P27659 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl3P27659 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.31■□□□□ 0.2
Rpl3P27659 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.31■□□□□ 0.2
Rpl3P27659 Gm37292-201ENSMUST00000192062 758 ntBASIC16.31■□□□□ 0.2
Rpl3P27659 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.31■□□□□ 0.2
Rpl3P27659 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpl3P27659 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl3P27659 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl3P27659 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl3P27659 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl3P27659 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl3P27659 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpl3P27659 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.3■□□□□ 0.2
Rpl3P27659 Trmt13-210ENSMUST00000198454 880 ntBASIC16.3■□□□□ 0.2
Rpl3P27659 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl3P27659 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl3P27659 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rpl3P27659 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpl3P27659 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl3P27659 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rpl3P27659 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl3P27659 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl3P27659 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl3P27659 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.29■□□□□ 0.2
Rpl3P27659 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rpl3P27659 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl3P27659 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpl3P27659 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpl3P27659 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.28■□□□□ 0.2
Rpl3P27659 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpl3P27659 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpl3P27659 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpl3P27659 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl3P27659 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Gm10517-202ENSMUST00000192970 758 ntBASIC16.27■□□□□ 0.2
Rpl3P27659 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.27■□□□□ 0.2
Rpl3P27659 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl3P27659 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rpl3P27659 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl3P27659 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl3P27659 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl3P27659 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.27■□□□□ 0.19
Rpl3P27659 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl3P27659 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.27■□□□□ 0.19
Rpl3P27659 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpl3P27659 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl3P27659 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms