Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf1bP25119 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Tnfrsf1bP25119 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Tnfrsf1bP25119 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf1bP25119 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm11539-201ENSMUST00000119837 557 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm13436-201ENSMUST00000120418 567 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm17661-201ENSMUST00000170317 270 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Gm7791-201ENSMUST00000219066 539 ntBASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf1bP25119 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Gm43799-201ENSMUST00000201845 579 ntBASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf1bP25119 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf1bP25119 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms