Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxd8P23463 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxd8P23463 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxd8P23463 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.73■□□□□ 0.43
Hoxd8P23463 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxd8P23463 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxd8P23463 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxd8P23463 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxd8P23463 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxd8P23463 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxd8P23463 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxd8P23463 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.71■□□□□ 0.43
Hoxd8P23463 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Hoxd8P23463 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxd8P23463 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxd8P23463 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxd8P23463 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxd8P23463 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxd8P23463 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.7■□□□□ 0.42
Hoxd8P23463 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxd8P23463 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Gm29707-201ENSMUST00000196325 491 ntBASIC17.7■□□□□ 0.42
Hoxd8P23463 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.7■□□□□ 0.42
Hoxd8P23463 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxd8P23463 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxd8P23463 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxd8P23463 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxd8P23463 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.69■□□□□ 0.42
Hoxd8P23463 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Hoxd8P23463 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hoxd8P23463 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hoxd8P23463 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hoxd8P23463 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hoxd8P23463 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hoxd8P23463 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.68■□□□□ 0.42
Hoxd8P23463 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hoxd8P23463 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxd8P23463 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.67■□□□□ 0.42
Hoxd8P23463 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hoxd8P23463 Gm34391-201ENSMUST00000203706 907 ntBASIC17.67■□□□□ 0.42
Hoxd8P23463 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxd8P23463 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxd8P23463 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms