Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pde6bP23440 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pde6bP23440 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Pde6bP23440 Gm17661-201ENSMUST00000170317 270 ntBASIC18.67■□□□□ 0.58
Pde6bP23440 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Pde6bP23440 Gm5587-201ENSMUST00000206270 674 ntBASIC18.67■□□□□ 0.58
Pde6bP23440 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pde6bP23440 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pde6bP23440 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.67■□□□□ 0.58
Pde6bP23440 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6bP23440 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.66■□□□□ 0.58
Pde6bP23440 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Gm9103-201ENSMUST00000119371 405 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Gm7284-201ENSMUST00000131667 944 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Gm9013-201ENSMUST00000132939 882 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Gm27741-201ENSMUST00000185060 237 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Ank2-226ENSMUST00000189368 339 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Gm7213-201ENSMUST00000215977 950 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pde6bP23440 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.66■□□□□ 0.58
Pde6bP23440 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6bP23440 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pde6bP23440 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pde6bP23440 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pde6bP23440 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.65■□□□□ 0.58
Pde6bP23440 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.65■□□□□ 0.58
Pde6bP23440 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.65■□□□□ 0.58
Pde6bP23440 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pde6bP23440 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.65■□□□□ 0.58
Pde6bP23440 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pde6bP23440 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6bP23440 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pde6bP23440 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.64■□□□□ 0.57
Pde6bP23440 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.64■□□□□ 0.57
Pde6bP23440 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pde6bP23440 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.64■□□□□ 0.57
Pde6bP23440 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pde6bP23440 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Pde6bP23440 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pde6bP23440 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pde6bP23440 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pde6bP23440 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms