Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.23□□□□□ -0.13
Cxcl1P12850 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cxcl1P12850 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl1P12850 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Mir6349-201ENSMUST00000184059 97 ntBASIC14.22□□□□□ -0.13
Cxcl1P12850 Gm26524-201ENSMUST00000192339 390 ntBASIC14.22□□□□□ -0.13
Cxcl1P12850 Mtag2-201ENSMUST00000058665 714 ntBASIC14.22□□□□□ -0.13
Cxcl1P12850 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.22□□□□□ -0.13
Cxcl1P12850 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl1P12850 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcl1P12850 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.21□□□□□ -0.13
Cxcl1P12850 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl1P12850 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl1P12850 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl1P12850 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Cxcl1P12850 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl1P12850 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl1P12850 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cxcl1P12850 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cxcl1P12850 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.2□□□□□ -0.14
Cxcl1P12850 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.2□□□□□ -0.14
Cxcl1P12850 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.2□□□□□ -0.14
Cxcl1P12850 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cxcl1P12850 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cxcl1P12850 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl1P12850 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl1P12850 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cxcl1P12850 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl1P12850 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Cxcl1P12850 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms