Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smim1P0C8K7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.86□□□□□ -0.51
Smim1P0C8K7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smim1P0C8K7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim1P0C8K7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.85□□□□□ -0.51
Smim1P0C8K7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim1P0C8K7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.84□□□□□ -0.51
Smim1P0C8K7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms