Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CfdP03953 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.37□□□□□ -0.11
CfdP03953 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CfdP03953 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CfdP03953 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CfdP03953 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CfdP03953 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.36□□□□□ -0.11
CfdP03953 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.36□□□□□ -0.11
CfdP03953 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CfdP03953 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.36□□□□□ -0.11
CfdP03953 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.36□□□□□ -0.11
CfdP03953 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CfdP03953 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CfdP03953 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CfdP03953 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CfdP03953 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CfdP03953 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CfdP03953 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CfdP03953 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Gm13401-201ENSMUST00000117074 291 ntBASIC14.34□□□□□ -0.11
CfdP03953 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CfdP03953 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CfdP03953 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
CfdP03953 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.34□□□□□ -0.11
CfdP03953 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.34□□□□□ -0.11
CfdP03953 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CfdP03953 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CfdP03953 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CfdP03953 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CfdP03953 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CfdP03953 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CfdP03953 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CfdP03953 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CfdP03953 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.33□□□□□ -0.12
CfdP03953 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CfdP03953 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CfdP03953 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CfdP03953 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CfdP03953 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CfdP03953 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CfdP03953 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms