Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.08■□□□□ 0.16
IghmP01872 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.08■□□□□ 0.16
IghmP01872 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IghmP01872 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IghmP01872 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IghmP01872 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IghmP01872 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IghmP01872 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.07■□□□□ 0.16
IghmP01872 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.07■□□□□ 0.16
IghmP01872 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.07■□□□□ 0.16
IghmP01872 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
IghmP01872 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
IghmP01872 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IghmP01872 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.06■□□□□ 0.16
IghmP01872 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Gm5643-201ENSMUST00000117081 966 ntBASIC16.06■□□□□ 0.16
IghmP01872 Gm17661-201ENSMUST00000170317 270 ntBASIC16.06■□□□□ 0.16
IghmP01872 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.06■□□□□ 0.16
IghmP01872 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IghmP01872 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.06■□□□□ 0.16
IghmP01872 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
IghmP01872 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.05■□□□□ 0.16
IghmP01872 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.05■□□□□ 0.16
IghmP01872 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.05■□□□□ 0.16
IghmP01872 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IghmP01872 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.04■□□□□ 0.16
IghmP01872 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
IghmP01872 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IghmP01872 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IghmP01872 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.04■□□□□ 0.16
IghmP01872 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.04■□□□□ 0.16
IghmP01872 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.04■□□□□ 0.16
IghmP01872 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.04■□□□□ 0.16
IghmP01872 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
IghmP01872 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IghmP01872 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
IghmP01872 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.03■□□□□ 0.16
IghmP01872 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
IghmP01872 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.03■□□□□ 0.16
IghmP01872 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
IghmP01872 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.03■□□□□ 0.16
IghmP01872 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
IghmP01872 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IghmP01872 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms