Protein–RNA interactions for Protein: P01810

Ig heavy chain V region J539, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01810 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.16■□□□□ 0.34
P01810 Gm18032-201ENSMUST00000222541 538 ntBASIC17.16■□□□□ 0.34
P01810 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01810 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.15■□□□□ 0.34
P01810 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
P01810 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
P01810 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
P01810 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.15■□□□□ 0.34
P01810 Gm13474-201ENSMUST00000122466 815 ntBASIC17.15■□□□□ 0.34
P01810 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.15■□□□□ 0.34
P01810 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.15■□□□□ 0.34
P01810 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.15■□□□□ 0.34
P01810 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
P01810 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.15■□□□□ 0.34
P01810 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01810 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
P01810 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.14■□□□□ 0.33
P01810 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
P01810 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
P01810 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.14■□□□□ 0.33
P01810 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.14■□□□□ 0.33
P01810 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P01810 Gm10566-201ENSMUST00000086739 996 ntBASIC17.14■□□□□ 0.33
P01810 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P01810 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
P01810 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01810 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
P01810 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P01810 Gm7213-201ENSMUST00000215977 950 ntBASIC17.13■□□□□ 0.33
P01810 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01810 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01810 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.12■□□□□ 0.33
P01810 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
P01810 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.12■□□□□ 0.33
P01810 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
P01810 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.12■□□□□ 0.33
P01810 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P01810 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
P01810 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01810 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01810 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.12■□□□□ 0.33
P01810 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01810 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01810 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01810 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.11■□□□□ 0.33
P01810 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01810 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01810 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
P01810 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01810 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01810 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms