Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vti1aO89116 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vti1aO89116 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Vti1aO89116 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vti1aO89116 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vti1aO89116 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.49■□□□□ 0.55
Vti1aO89116 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Gm7638-201ENSMUST00000121348 967 ntBASIC18.49■□□□□ 0.55
Vti1aO89116 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.49■□□□□ 0.55
Vti1aO89116 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vti1aO89116 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vti1aO89116 Idnk-204ENSMUST00000226010 1898 ntBASIC18.49■□□□□ 0.55
Vti1aO89116 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vti1aO89116 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.48■□□□□ 0.55
Vti1aO89116 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vti1aO89116 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Gm25016-201ENSMUST00000158399 131 ntBASIC18.48■□□□□ 0.55
Vti1aO89116 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
Vti1aO89116 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.48■□□□□ 0.55
Vti1aO89116 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vti1aO89116 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.48■□□□□ 0.55
Vti1aO89116 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Vti1aO89116 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vti1aO89116 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.48■□□□□ 0.55
Vti1aO89116 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vti1aO89116 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vti1aO89116 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Vti1aO89116 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vti1aO89116 Gm16061-201ENSMUST00000122167 857 ntBASIC18.47■□□□□ 0.55
Vti1aO89116 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.47■□□□□ 0.55
Vti1aO89116 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Vti1aO89116 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vti1aO89116 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vti1aO89116 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vti1aO89116 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.46■□□□□ 0.55
Vti1aO89116 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.46■□□□□ 0.55
Vti1aO89116 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.46■□□□□ 0.55
Vti1aO89116 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vti1aO89116 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vti1aO89116 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Gm13474-201ENSMUST00000122466 815 ntBASIC18.46■□□□□ 0.55
Vti1aO89116 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.46■□□□□ 0.55
Vti1aO89116 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Vti1aO89116 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vti1aO89116 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms