Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CopeO89079 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CopeO89079 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CopeO89079 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.73■□□□□ 0.43
CopeO89079 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.73■□□□□ 0.43
CopeO89079 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CopeO89079 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CopeO89079 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.72■□□□□ 0.43
CopeO89079 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.72■□□□□ 0.43
CopeO89079 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CopeO89079 Gm26524-201ENSMUST00000192339 390 ntBASIC17.72■□□□□ 0.43
CopeO89079 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CopeO89079 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.72■□□□□ 0.43
CopeO89079 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CopeO89079 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.72■□□□□ 0.43
CopeO89079 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CopeO89079 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CopeO89079 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CopeO89079 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CopeO89079 Gm11643-201ENSMUST00000119578 864 ntBASIC17.71■□□□□ 0.43
CopeO89079 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CopeO89079 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CopeO89079 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CopeO89079 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CopeO89079 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.7■□□□□ 0.42
CopeO89079 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CopeO89079 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.7■□□□□ 0.42
CopeO89079 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CopeO89079 Rab3c-203ENSMUST00000224180 967 ntBASIC17.7■□□□□ 0.42
CopeO89079 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CopeO89079 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CopeO89079 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Gm10849-201ENSMUST00000100397 618 ntBASIC17.69■□□□□ 0.42
CopeO89079 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.69■□□□□ 0.42
CopeO89079 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.69■□□□□ 0.42
CopeO89079 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Mtag2-201ENSMUST00000058665 714 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms