Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.49■□□□□ 0.23
Best1O88870 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Best1O88870 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Best1O88870 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.49■□□□□ 0.23
Best1O88870 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Best1O88870 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.48■□□□□ 0.23
Best1O88870 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.48■□□□□ 0.23
Best1O88870 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.48■□□□□ 0.23
Best1O88870 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.48■□□□□ 0.23
Best1O88870 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Best1O88870 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Best1O88870 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Best1O88870 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Best1O88870 Gm13186-201ENSMUST00000118031 316 ntBASIC16.47■□□□□ 0.23
Best1O88870 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Best1O88870 Gm33142-201ENSMUST00000193913 867 ntBASIC16.47■□□□□ 0.23
Best1O88870 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Best1O88870 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Best1O88870 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Best1O88870 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.47■□□□□ 0.23
Best1O88870 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Best1O88870 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Best1O88870 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Best1O88870 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.46■□□□□ 0.23
Best1O88870 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.46■□□□□ 0.23
Best1O88870 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.46■□□□□ 0.23
Best1O88870 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Best1O88870 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Best1O88870 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.46■□□□□ 0.22
Best1O88870 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Best1O88870 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.45■□□□□ 0.22
Best1O88870 Gm37722-201ENSMUST00000193757 208 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms