Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.71■□□□□ 0.27
ClppO88696 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
ClppO88696 Gm7889-201ENSMUST00000185591 958 ntBASIC16.71■□□□□ 0.27
ClppO88696 Gm4974-201ENSMUST00000209974 875 ntBASIC16.71■□□□□ 0.27
ClppO88696 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ClppO88696 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.71■□□□□ 0.26
ClppO88696 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ClppO88696 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.7■□□□□ 0.26
ClppO88696 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.7■□□□□ 0.26
ClppO88696 Gm38027-201ENSMUST00000192315 235 ntBASIC16.7■□□□□ 0.26
ClppO88696 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ClppO88696 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.7■□□□□ 0.26
ClppO88696 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.7■□□□□ 0.26
ClppO88696 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ClppO88696 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ClppO88696 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClppO88696 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.69■□□□□ 0.26
ClppO88696 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ClppO88696 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ClppO88696 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.69■□□□□ 0.26
ClppO88696 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.69■□□□□ 0.26
ClppO88696 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ClppO88696 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClppO88696 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.68■□□□□ 0.26
ClppO88696 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ClppO88696 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
ClppO88696 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.68■□□□□ 0.26
ClppO88696 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.68■□□□□ 0.26
ClppO88696 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 Gm18959-201ENSMUST00000208954 655 ntBASIC16.68■□□□□ 0.26
ClppO88696 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ClppO88696 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ClppO88696 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClppO88696 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.68■□□□□ 0.26
ClppO88696 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ClppO88696 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms