Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cops6O88545 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.95■□□□□ 0.94
Cops6O88545 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cops6O88545 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cops6O88545 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cops6O88545 Olfr129-201ENSMUST00000122318 993 ntBASIC20.94■□□□□ 0.94
Cops6O88545 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Gm27357-201ENSMUST00000183754 135 ntBASIC20.94■□□□□ 0.94
Cops6O88545 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.94■□□□□ 0.94
Cops6O88545 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cops6O88545 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cops6O88545 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops6O88545 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cops6O88545 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.93■□□□□ 0.94
Cops6O88545 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Gm11336-201ENSMUST00000118168 334 ntBASIC20.93■□□□□ 0.94
Cops6O88545 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Cops6O88545 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops6O88545 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.92■□□□□ 0.94
Cops6O88545 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cops6O88545 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Gm13186-201ENSMUST00000118031 316 ntBASIC20.92■□□□□ 0.94
Cops6O88545 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.92■□□□□ 0.94
Cops6O88545 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.92■□□□□ 0.94
Cops6O88545 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops6O88545 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.91■□□□□ 0.94
Cops6O88545 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.91■□□□□ 0.94
Cops6O88545 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.91■□□□□ 0.94
Cops6O88545 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops6O88545 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Phf7-203ENSMUST00000226565 1971 ntBASIC20.9■□□□□ 0.94
Cops6O88545 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.9■□□□□ 0.94
Cops6O88545 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.9■□□□□ 0.94
Cops6O88545 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cops6O88545 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops6O88545 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.9■□□□□ 0.94
Cops6O88545 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops6O88545 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cops6O88545 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms