Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cacna1hO88427 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.69■□□□□ 0.26
Cacna1hO88427 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cacna1hO88427 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.69■□□□□ 0.26
Cacna1hO88427 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1hO88427 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Cacna1hO88427 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.68■□□□□ 0.26
Cacna1hO88427 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Gm43767-201ENSMUST00000198933 381 ntBASIC16.68■□□□□ 0.26
Cacna1hO88427 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1hO88427 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.67■□□□□ 0.26
Cacna1hO88427 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.67■□□□□ 0.26
Cacna1hO88427 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cacna1hO88427 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1hO88427 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cacna1hO88427 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1hO88427 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cacna1hO88427 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.66■□□□□ 0.26
Cacna1hO88427 Gm8396-201ENSMUST00000057361 823 ntBASIC16.66■□□□□ 0.26
Cacna1hO88427 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cacna1hO88427 Gm27628-201ENSMUST00000184911 107 ntBASIC16.66■□□□□ 0.26
Cacna1hO88427 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1hO88427 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cacna1hO88427 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Gm25990-201ENSMUST00000102440 86 ntBASIC16.65■□□□□ 0.26
Cacna1hO88427 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.65■□□□□ 0.26
Cacna1hO88427 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.65■□□□□ 0.26
Cacna1hO88427 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.65■□□□□ 0.26
Cacna1hO88427 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1hO88427 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Gm29791-202ENSMUST00000207888 369 ntBASIC16.64■□□□□ 0.25
Cacna1hO88427 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1hO88427 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms