Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.28■□□□□ 0.2
Tgfbr3O88393 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Mzt1-203ENSMUST00000227948 952 ntBASIC16.28■□□□□ 0.2
Tgfbr3O88393 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfbr3O88393 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.27■□□□□ 0.2
Tgfbr3O88393 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tgfbr3O88393 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tgfbr3O88393 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Tgfbr3O88393 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tgfbr3O88393 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tgfbr3O88393 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tgfbr3O88393 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tgfbr3O88393 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tgfbr3O88393 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Birc2-201ENSMUST00000054878 378 ntBASIC16.25■□□□□ 0.19
Tgfbr3O88393 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tgfbr3O88393 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms