Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rdh5O55240 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Rdh5O55240 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rdh5O55240 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh5O55240 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rdh5O55240 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rdh5O55240 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Mir1199-201ENSMUST00000117015 119 ntBASIC16.25■□□□□ 0.19
Rdh5O55240 Gm715-201ENSMUST00000117865 831 ntBASIC16.25■□□□□ 0.19
Rdh5O55240 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.25■□□□□ 0.19
Rdh5O55240 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.25■□□□□ 0.19
Rdh5O55240 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh5O55240 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.24■□□□□ 0.19
Rdh5O55240 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.24■□□□□ 0.19
Rdh5O55240 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rdh5O55240 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rdh5O55240 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rdh5O55240 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh5O55240 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rdh5O55240 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rdh5O55240 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rdh5O55240 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Rdh5O55240 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rdh5O55240 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.23■□□□□ 0.19
Rdh5O55240 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.23■□□□□ 0.19
Rdh5O55240 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.23■□□□□ 0.19
Rdh5O55240 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rdh5O55240 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rdh5O55240 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.23■□□□□ 0.19
Rdh5O55240 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh5O55240 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.22■□□□□ 0.19
Rdh5O55240 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rdh5O55240 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.22■□□□□ 0.19
Rdh5O55240 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.22■□□□□ 0.19
Rdh5O55240 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh5O55240 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms