Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SncaO55042 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SncaO55042 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.23□□□□□ -0.13
SncaO55042 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Gm10849-201ENSMUST00000100397 618 ntBASIC14.23□□□□□ -0.13
SncaO55042 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SncaO55042 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SncaO55042 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SncaO55042 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
SncaO55042 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.23□□□□□ -0.13
SncaO55042 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SncaO55042 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.22□□□□□ -0.13
SncaO55042 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.22□□□□□ -0.13
SncaO55042 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SncaO55042 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SncaO55042 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.22□□□□□ -0.13
SncaO55042 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.22□□□□□ -0.13
SncaO55042 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SncaO55042 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SncaO55042 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SncaO55042 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.21□□□□□ -0.13
SncaO55042 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.21□□□□□ -0.13
SncaO55042 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Rab3c-203ENSMUST00000224180 967 ntBASIC14.21□□□□□ -0.13
SncaO55042 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SncaO55042 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SncaO55042 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SncaO55042 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SncaO55042 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SncaO55042 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
SncaO55042 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SncaO55042 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SncaO55042 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SncaO55042 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.2□□□□□ -0.14
SncaO55042 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Mir8112-201ENSMUST00000184382 131 ntBASIC14.2□□□□□ -0.14
SncaO55042 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SncaO55042 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SncaO55042 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.2□□□□□ -0.14
SncaO55042 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms