Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Gm11355-201ENSMUST00000121120 306 ntBASIC14.53□□□□□ -0.08
Cxcl13O55038 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Gm5587-201ENSMUST00000206270 674 ntBASIC14.53□□□□□ -0.08
Cxcl13O55038 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cxcl13O55038 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl13O55038 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl13O55038 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl13O55038 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.52□□□□□ -0.08
Cxcl13O55038 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl13O55038 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl13O55038 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.52□□□□□ -0.09
Cxcl13O55038 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.52□□□□□ -0.09
Cxcl13O55038 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.52□□□□□ -0.09
Cxcl13O55038 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl13O55038 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm14859-201ENSMUST00000117752 357 ntBASIC14.51□□□□□ -0.09
Cxcl13O55038 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Gm10819-201ENSMUST00000099988 561 ntBASIC14.51□□□□□ -0.09
Cxcl13O55038 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.51□□□□□ -0.09
Cxcl13O55038 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl13O55038 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cxcl13O55038 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cxcl13O55038 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cxcl13O55038 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cxcl13O55038 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl13O55038 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cxcl13O55038 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cxcl13O55038 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cxcl13O55038 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl13O55038 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.49□□□□□ -0.09
Cxcl13O55038 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl13O55038 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl13O55038 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl13O55038 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.49□□□□□ -0.09
Cxcl13O55038 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl13O55038 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cxcl13O55038 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl13O55038 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms